Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | E1J03_06800 | Not Available | Negative | 1576642 - 1578090 | 54905.3 |
| hypothetical protein | E1J03_06805 | Not Available | Negative | 1578108 - 1578563 | 17156.6 |
| peptidase domain-containing abc transporter | E1J03_06810 | Not Available | Negative | 1578566 - 1580755 | 83135.5 |
| hypothetical protein | E1J03_06815 | Not Available | Negative | 1581104 - 1582963 | 71803.2 |
| hypothetical protein | E1J03_06820 | Not Available | Negative | 1584426 - 1585688 | 47184.5 |
| type iv secretory system conjugative dna transfer family protein | E1J03_06825 | Not Available | Negative | 1585962 - 1588145 | 83242.5 |
| duf1566 domain-containing protein | E1J03_06830 | Not Available | Negative | 1588164 - 1588910 | 27096.3 |
| hypothetical protein | E1J03_06835 | Not Available | Negative | 1588991 - 1589512 | 19647.5 |
| conjugative transposon protein tran | E1J03_06840 | Not Available | Negative | 1589524 - 1590369 | 32274.7 |
| conjugative transposon protein tram | E1J03_06845 | Not Available | Negative | 1590501 - 1591751 | 46675.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

