Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | E1J03_00245 | Not Available | Negative | 49441 - 49899 | 17087.9 |
| hypothetical protein | E1J03_00250 | Not Available | Negative | 50016 - 50399 | 15190.0 |
| hlyc/corc family transporter | E1J03_00255 | Not Available | Negative | 50422 - 51708 | 47985.9 |
| nudix domain-containing protein | E1J03_00260 | Not Available | Positive | 51843 - 52367 | 19856.6 |
| tetratricopeptide repeat protein | E1J03_00265 | Not Available | Positive | 52377 - 55280 | 111160.0 |
| tonb-dependent receptor | E1J03_00270 | Not Available | Positive | 55304 - 57001 | 64427.8 |
| type i dna topoisomerase | E1J03_00275 | Not Available | Positive | 57123 - 59561 | 91414.3 |
| shikimate kinase | E1J03_00280 | Not Available | Positive | 59558 - 60085 | 20411.6 |
| biosynthetic arginine decarboxylase | E1J03_00285 | Not Available | Positive | 60126 - 62018 | 71492.0 |
| acetylglutamate kinase | E1J03_00290 | Not Available | Positive | 62023 - 62796 | 27055.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

