Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | E1J03_06480 | Not Available | Positive | 1505350 - 1506552 | 46815.4 |
| dna primase | E1J03_06485 | Not Available | Positive | 1506704 - 1507570 | 32550.4 |
| hypothetical protein | E1J03_06490 | Not Available | Positive | 1507776 - 1508171 | 14697.0 |
| relaxase | E1J03_06495 | Not Available | Positive | 1508192 - 1509373 | 44735.1 |
| duf1848 domain-containing protein | E1J03_06510 | Not Available | Positive | 1511983 - 1513047 | 40881.9 |
| atp-dependent dna helicase recq | E1J03_06515 | Not Available | Positive | 1513821 - 1517168 | 128851.0 |
| hypothetical protein | E1J03_06520 | Not Available | Positive | 1517165 - 1517563 | 14811.7 |
| duf1016 family protein | E1J03_06525 | Not Available | Positive | 1517588 - 1518838 | 47991.1 |
| comf family protein | E1J03_06535 | Not Available | Negative | 1520373 - 1521182 | 31331.2 |
| single-stranded dna-binding protein | E1J03_06540 | Not Available | Positive | 1521990 - 1522367 | 14225.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

