Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-dependent thiol peroxidase | E1J03_06430 | Not Available | Negative | 1495536 - 1495982 | 16951.5 |
| saccharopine dehydrogenase family protein | E1J03_06435 | Not Available | Negative | 1496058 - 1497251 | 44965.5 |
| hypothetical protein | E1J03_06440 | Not Available | Negative | 1497335 - 1498588 | 47900.2 |
| meta domain-containing protein | E1J03_06445 | Not Available | Positive | 1498713 - 1499504 | 28702.0 |
| molecular chaperone dnak | E1J03_06450 | Not Available | Positive | 1499833 - 1501752 | 68477.3 |
| helix-turn-helix domain-containing protein | E1J03_06455 | Not Available | Positive | 1501951 - 1502502 | 21420.3 |
| site-specific integrase | E1J03_06460 | Not Available | Positive | 1502511 - 1503770 | 47989.7 |
| hypothetical protein | E1J03_06465 | Not Available | Positive | 1503791 - 1504417 | 24479.9 |
| hypothetical protein | E1J03_06470 | Not Available | Positive | 1504420 - 1504818 | 15359.7 |
| dna-binding protein | E1J03_06475 | Not Available | Positive | 1505004 - 1505363 | 14065.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

