Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | E1J03_06330 | Not Available | Positive | 1471867 - 1473147 | 46543.3 |
| histidinol-phosphate transaminase | E1J03_06335 | Not Available | Positive | 1473150 - 1474190 | 39609.4 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | E1J03_06340 | Not Available | Positive | 1474194 - 1475312 | 42286.8 |
| nad(+) synthase | E1J03_06345 | Not Available | Negative | 1475402 - 1477327 | 71126.6 |
| transcriptional repressor | E1J03_06350 | Not Available | Positive | 1477492 - 1477914 | 16089.5 |
| nadh peroxidase | E1J03_06355 | Not Available | Positive | 1477979 - 1478530 | 20566.4 |
| thioredoxin | E1J03_06360 | Not Available | Negative | 1478635 - 1479093 | 17119.0 |
| thioredoxin | E1J03_06365 | Not Available | Negative | 1479097 - 1479393 | 11316.0 |
| omph family outer membrane protein | E1J03_06370 | Not Available | Negative | 1479665 - 1480276 | 23015.2 |
| hypothetical protein | E1J03_06375 | Not Available | Negative | 1480299 - 1480526 | 8203.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

