Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | E1J03_06280 | Not Available | Positive | 1463643 - 1464998 | 50721.4 |
| pas domain-containing protein | E1J03_06285 | Not Available | Positive | 1465021 - 1466316 | 49025.2 |
| hypothetical protein | E1J03_06290 | Not Available | Positive | 1466559 - 1466726 | 6471.89 |
| hypothetical protein | E1J03_06295 | Not Available | Negative | 1467070 - 1467339 | 10021.3 |
| hypothetical protein | E1J03_06300 | Not Available | Positive | 1467365 - 1467553 | 6801.01 |
| lytic transglycosylase f | E1J03_06305 | Not Available | Negative | 1467841 - 1469220 | 51989.1 |
| uridine kinase | E1J03_06310 | Not Available | Negative | 1469217 - 1469828 | 23296.4 |
| dabb family protein | E1J03_06315 | Not Available | Positive | 1469935 - 1470234 | 11114.5 |
| paai family thioesterase | E1J03_06320 | Not Available | Positive | 1470245 - 1470736 | 18778.8 |
| atp phosphoribosyltransferase | E1J03_06325 | Not Available | Positive | 1470966 - 1471817 | 31320.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

