Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | E1J03_06180 | Not Available | Negative | 1442850 - 1443329 | 17759.2 |
| heavy metal-binding domain-containing protein | E1J03_06185 | Not Available | Positive | 1443548 - 1443871 | 11453.6 |
| duf4476 domain-containing protein | E1J03_06190 | Not Available | Negative | 1443941 - 1444552 | 22923.7 |
| duf4476 domain-containing protein | E1J03_06195 | Not Available | Negative | 1444586 - 1445257 | 25531.0 |
| rna polymerase sigma factor | E1J03_06200 | Not Available | Positive | 1445564 - 1446100 | 21672.9 |
| hypothetical protein | E1J03_06205 | Not Available | Positive | 1446108 - 1446470 | 13824.5 |
| hypothetical protein | E1J03_06210 | Not Available | Positive | 1446492 - 1447040 | 21513.4 |
| hypothetical protein | E1J03_06215 | Not Available | Positive | 1447198 - 1447839 | 24825.6 |
| lysm peptidoglycan-binding domain-containing protein | E1J03_06220 | Not Available | Positive | 1447945 - 1448841 | 35133.6 |
| hlyd family efflux transporter periplasmic adaptor subunit | E1J03_06225 | Not Available | Positive | 1449003 - 1450250 | 46506.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

