Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | E1J03_00190 | Not Available | Positive | 36772 - 38844 | 79272.7 |
| sufe family protein | E1J03_00195 | Not Available | Negative | 38879 - 39307 | 16170.5 |
| m28 family peptidase | E1J03_00200 | Not Available | Negative | 39319 - 40323 | 37735.6 |
| phosphate butyryltransferase | E1J03_00210 | Not Available | Positive | 42238 - 43146 | 33302.3 |
| butyrate kinase | E1J03_00215 | Not Available | Positive | 43159 - 44223 | 38457.6 |
| helicase | E1J03_00220 | Not Available | Negative | 44360 - 45610 | 48055.3 |
| hypothetical protein | E1J03_00225 | Not Available | Negative | 46040 - 46231 | 7024.51 |
| hypothetical protein | E1J03_00230 | Not Available | Negative | 46447 - 46845 | 15196.1 |
| tonb-dependent receptor | E1J03_00235 | Not Available | Negative | 46952 - 48616 | 64717.2 |
| duf4491 family protein | E1J03_00240 | Not Available | Negative | 49120 - 49434 | 12155.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

