Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_06025 | Not Available | Positive | 1408712 - 1410283 | 58385.7 |
| rpn family recombination-promoting nuclease/putative transposase | E1J03_06030 | Not Available | Positive | 1410416 - 1411312 | 34249.3 |
| duf4421 domain-containing protein | E1J03_06035 | Not Available | Negative | 1411455 - 1412582 | 43164.4 |
| gfo/idh/moca family oxidoreductase | E1J03_06040 | Not Available | Negative | 1412592 - 1413581 | 36874.2 |
| transporter substrate-binding domain-containing protein | E1J03_06045 | Not Available | Negative | 1413670 - 1414488 | 30891.0 |
| hypothetical protein | E1J03_06050 | Not Available | Negative | 1414497 - 1416608 | 80743.2 |
| hypothetical protein | E1J03_06055 | Not Available | Positive | 1416520 - 1416708 | 7558.39 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | E1J03_06060 | Not Available | Negative | 1416702 - 1417244 | 19916.6 |
| 2-oxoglutarate oxidoreductase | E1J03_06065 | Not Available | Negative | 1417258 - 1418022 | 27927.9 |
| hypothetical protein | E1J03_06070 | Not Available | Negative | 1418041 - 1418208 | 6370.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

