Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| epsg family protein | E1J03_05865 | Not Available | Positive | 1370840 - 1371871 | 39827.9 |
| glycosyltransferase | E1J03_05870 | Not Available | Positive | 1371940 - 1373046 | 41618.2 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | E1J03_05885 | Not Available | Positive | 1374788 - 1375894 | 40961.6 |
| hypothetical protein | E1J03_05890 | Not Available | Positive | 1375891 - 1376166 | 11316.4 |
| hypothetical protein | E1J03_05895 | Not Available | Positive | 1376172 - 1377044 | 33505.6 |
| hypothetical protein | E1J03_05900 | Not Available | Positive | 1377057 - 1377473 | 15999.8 |
| aaa family atpase | E1J03_05905 | Not Available | Positive | 1377601 - 1379325 | 67751.2 |
| dead/deah box helicase | E1J03_05910 | Not Available | Positive | 1379668 - 1381983 | 88619.5 |
| amidohydrolase | E1J03_05915 | Not Available | Positive | 1382246 - 1383007 | 28447.8 |
| indolepyruvate ferredoxin oxidoreductase | E1J03_05920 | Not Available | Positive | 1383031 - 1384647 | 58753.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

