Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_05815 | Not Available | Negative | 1362775 - 1363083 | 12822.1 |
| n-acetylmuramoyl-l-alanine amidase | E1J03_05820 | Not Available | Negative | 1363110 - 1363523 | 15449.8 |
| dna-binding protein | E1J03_05825 | Not Available | Negative | 1363714 - 1364187 | 16699.9 |
| duf4248 domain-containing protein | E1J03_05830 | Not Available | Positive | 1364463 - 1364702 | 9164.97 |
| bifunctional dna primase/helicase | E1J03_05835 | Not Available | Negative | 1364849 - 1366756 | 71640.4 |
| hypothetical protein | E1J03_05840 | Not Available | Negative | 1366891 - 1367931 | 39439.6 |
| hypothetical protein | E1J03_05845 | Not Available | Positive | 1368429 - 1368704 | 10213.1 |
| acyltransferase | E1J03_05850 | Not Available | Positive | 1368708 - 1369187 | 17374.0 |
| mannosyltransferase | E1J03_05855 | Not Available | Positive | 1369214 - 1369978 | 29378.3 |
| glycosyltransferase | E1J03_05860 | Not Available | Positive | 1370012 - 1370806 | 30390.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

