Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | E1J03_05755 | Not Available | Positive | 1352421 - 1353107 | 25646.9 |
| transcriptional regulator | E1J03_05760 | Not Available | Positive | 1353646 - 1354479 | 31793.4 |
| nucleotidyltransferase domain-containing protein | E1J03_05765 | Not Available | Positive | 1354590 - 1354904 | 12028.4 |
| hypothetical protein | E1J03_05770 | Not Available | Positive | 1354901 - 1355101 | 7749.56 |
| transposase domain-containing protein | E1J03_05775 | Not Available | Positive | 1355691 - 1355786 | 3847.71 |
| 3-deoxy-8-phosphooctulonate synthase | E1J03_05780 | Not Available | Positive | 1355848 - 1356603 | 27882.9 |
| kpsf/gutq family sugar-phosphate isomerase | E1J03_05785 | Not Available | Positive | 1356600 - 1357550 | 34991.6 |
| cytidyltransferase | E1J03_05790 | Not Available | Positive | 1357568 - 1358869 | 48833.1 |
| hypothetical protein | E1J03_05795 | Not Available | Positive | 1359092 - 1359319 | 8639.71 |
| polysaccharide biosynthesis protein | E1J03_05800 | Not Available | Positive | 1359362 - 1360780 | 53018.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

