Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyprenol monophosphomannose synthase | E1J03_05700 | Not Available | Negative | 1336438 - 1337187 | 28432.6 |
| porin family protein | E1J03_05705 | Not Available | Negative | 1337340 - 1337966 | 23497.7 |
| copper homeostasis protein | E1J03_05715 | Not Available | Negative | 1338768 - 1339256 | 17131.3 |
| peptidase s41 | E1J03_05720 | Not Available | Negative | 1339414 - 1340811 | 52297.7 |
| bifunctional aspartate transaminase/aspartate 4-decarboxylase | E1J03_05725 | Not Available | Negative | 1340960 - 1342600 | 62566.1 |
| aspartate-alanine antiporter | E1J03_05730 | Not Available | Negative | 1342621 - 1344321 | 61206.6 |
| hypothetical protein | E1J03_05735 | Not Available | Positive | 1344448 - 1345269 | 31744.8 |
| tetratricopeptide repeat protein | E1J03_05740 | Not Available | Negative | 1345261 - 1347438 | 86294.6 |
| duf418 domain-containing protein | E1J03_05745 | Not Available | Negative | 1347500 - 1348684 | 45032.7 |
| transcription-repair coupling factor | E1J03_05750 | Not Available | Positive | 1348792 - 1352157 | 127163.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

