Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | E1J03_05460 | Not Available | Positive | 1291553 - 1291864 | 12135.7 |
| hypothetical protein | E1J03_05465 | Not Available | Negative | 1291856 - 1292242 | 13756.5 |
| dna-binding protein | E1J03_05470 | Not Available | Positive | 1292195 - 1292518 | 12499.0 |
| hypothetical protein | E1J03_05475 | Not Available | Positive | 1292712 - 1292897 | 6863.39 |
| hypothetical protein | E1J03_05480 | Not Available | Positive | 1292870 - 1293310 | 16255.8 |
| sigma-70 family rna polymerase sigma factor | E1J03_05485 | Not Available | Negative | 1293472 - 1294032 | 22212.6 |
| hypothetical protein | E1J03_05490 | Not Available | Positive | 1294058 - 1294249 | 7352.87 |
| kila-n domain-containing protein | E1J03_05500 | Not Available | Negative | 1294740 - 1295543 | 30740.0 |
| hypothetical protein | E1J03_05505 | Not Available | Negative | 1295510 - 1296046 | 21033.1 |
| urea transporter | E1J03_05645 | Not Available | Positive | 1323186 - 1324058 | 31460.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

