Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | E1J03_05410 | Not Available | Negative | 1279403 - 1282099 | 98617.1 |
| hypothetical protein | E1J03_05415 | Not Available | Positive | 1282814 - 1283053 | 9121.88 |
| carboxymuconolactone decarboxylase | E1J03_05420 | Not Available | Negative | 1283267 - 1284874 | 59896.7 |
| lactonase family protein | E1J03_05425 | Not Available | Negative | 1284899 - 1286053 | 42627.1 |
| arac family transcriptional regulator | E1J03_05430 | Not Available | Positive | 1286333 - 1287253 | 35443.6 |
| integrase | E1J03_05435 | Not Available | Negative | 1287322 - 1288248 | 35871.6 |
| hypothetical protein | E1J03_05440 | Not Available | Negative | 1288256 - 1289017 | 29186.2 |
| mobilization protein | E1J03_05445 | Not Available | Negative | 1289046 - 1289996 | 36048.1 |
| plasmid mobilization relaxosome protein mobc | E1J03_05450 | Not Available | Negative | 1289971 - 1290375 | 15014.6 |
| duf3408 domain-containing protein | E1J03_05455 | Not Available | Negative | 1290572 - 1291075 | 19059.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

