Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_05355 | Not Available | Negative | 1270862 - 1271047 | 7024.7 |
| hypothetical protein | E1J03_05360 | Not Available | Positive | 1271049 - 1271270 | 8694.83 |
| hypothetical protein | E1J03_05370 | Not Available | Positive | 1272530 - 1272823 | 11120.1 |
| integrase | E1J03_05375 | Not Available | Positive | 1273026 - 1273256 | 8991.06 |
| flavodoxin | E1J03_05380 | Not Available | Negative | 1273342 - 1273764 | 15689.8 |
| alpha/beta fold hydrolase | E1J03_05385 | Not Available | Negative | 1273924 - 1274955 | 39223.8 |
| twin-arginine translocation signal domain-containing protein | E1J03_05390 | Not Available | Negative | 1274963 - 1276117 | 42885.9 |
| duf296 domain-containing protein | E1J03_05395 | Not Available | Negative | 1276262 - 1276819 | 20755.2 |
| crp/fnr family transcriptional regulator | E1J03_05400 | Not Available | Negative | 1277162 - 1277764 | 23472.4 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_05405 | Not Available | Negative | 1277774 - 1279366 | 60955.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

