Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4091 domain-containing protein | E1J03_05095 | Not Available | Negative | 1200720 - 1202468 | 66538.4 |
| ahpc/tsa family protein | E1J03_05100 | Not Available | Positive | 1202602 - 1203597 | 37137.6 |
| dicarboxylate/amino acid:cation symporter | E1J03_05105 | Not Available | Negative | 1203690 - 1204844 | 41242.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | E1J03_05110 | Not Available | Negative | 1205080 - 1206693 | 59938.9 |
| susc/raga family tonb-linked outer membrane protein | E1J03_05115 | Not Available | Negative | 1206713 - 1210129 | 125425.0 |
| fecr family protein | E1J03_05120 | Not Available | Negative | 1210280 - 1211206 | 35797.9 |
| phosphoglycerate kinase | E1J03_05125 | Not Available | Positive | 1211429 - 1212682 | 44025.9 |
| hypothetical protein | E1J03_05130 | Not Available | Negative | 1212767 - 1213981 | 45620.1 |
| beta-hexosaminidase | E1J03_05135 | Not Available | Negative | 1214168 - 1216591 | 90804.1 |
| duf1624 domain-containing protein | E1J03_05140 | Not Available | Positive | 1216792 - 1217883 | 40467.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

