Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | E1J03_04990 | Not Available | Positive | 1165590 - 1168850 | 118596.0 |
| ragb/susd family nutrient uptake outer membrane protein | E1J03_04995 | Not Available | Positive | 1168866 - 1170515 | 62837.9 |
| glycoside hydrolase family 2 protein | E1J03_05000 | Not Available | Positive | 1170645 - 1172981 | 89483.9 |
| hybrid sensor histidine kinase/response regulator | E1J03_05005 | Not Available | Positive | 1173043 - 1177317 | 163103.0 |
| hypothetical protein | E1J03_05010 | Not Available | Negative | 1177338 - 1178207 | 34034.8 |
| hypothetical protein | E1J03_05015 | Not Available | Negative | 1178204 - 1178506 | 11653.6 |
| hypothetical protein | E1J03_05020 | Not Available | Positive | 1178741 - 1179208 | 16072.3 |
| hypothetical protein | E1J03_05025 | Not Available | Positive | 1179210 - 1179872 | 24866.4 |
| cobaltochelatase subunit cobn | E1J03_05035 | Not Available | Positive | 1182088 - 1186563 | 166320.0 |
| hypothetical protein | E1J03_05040 | Not Available | Positive | 1186570 - 1187259 | 25196.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

