Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine:cation symporter family protein | E1J03_04930 | Not Available | Negative | 1145093 - 1146493 | 50906.1 |
| atp-binding protein | E1J03_04935 | Not Available | Negative | 1146499 - 1147146 | 24871.2 |
| helix-turn-helix domain-containing protein | E1J03_04940 | Not Available | Positive | 1147279 - 1151238 | 149396.0 |
| n-acetyltransferase | E1J03_04945 | Not Available | Positive | 1151388 - 1151666 | 10461.6 |
| thiol:disulfide interchange protein | E1J03_04955 | Not Available | Negative | 1153228 - 1155261 | 74749.9 |
| arac family transcriptional regulator | E1J03_04960 | Not Available | Negative | 1155394 - 1157145 | 68479.7 |
| Trna-ser | Not Available | Not Available | Positive | 1157276 - 1157360 | Not Available |
| ompa family protein | E1J03_04970 | Not Available | Negative | 1158085 - 1159275 | 45239.8 |
| helix-turn-helix domain-containing protein | E1J03_04980 | Not Available | Negative | 1162603 - 1163511 | 35478.1 |
| exopolygalacturonase | E1J03_04985 | Not Available | Negative | 1163847 - 1165184 | 50652.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

