Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E1J03_04880 | Not Available | Negative | 1138740 - 1139540 | 30021.9 |
| ribonuclease y | E1J03_04885 | Not Available | Negative | 1139730 - 1141265 | 57327.7 |
| cell division protein zapa | E1J03_04890 | Not Available | Negative | 1141369 - 1141662 | 11773.0 |
| hypothetical protein | E1J03_04895 | Not Available | Negative | 1141692 - 1141985 | 11726.2 |
| duf454 domain-containing protein | E1J03_04900 | Not Available | Negative | 1142158 - 1142520 | 14021.8 |
| 6-carboxytetrahydropterin synthase qued | E1J03_04905 | Not Available | Positive | 1142655 - 1142987 | 12743.2 |
| radical sam protein | E1J03_04910 | Not Available | Positive | 1142974 - 1143519 | 20579.5 |
| Trna-trp | Not Available | Not Available | Positive | 1143575 - 1143650 | Not Available |
| uracil-dna glycosylase family protein | E1J03_04920 | Not Available | Negative | 1143718 - 1144311 | 23042.3 |
| hypothetical protein | E1J03_04925 | Not Available | Negative | 1144326 - 1144952 | 24301.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

