Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | strain RJX1045 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1922863 bp
Thymine Count
1979528 bp
Guanine Count
1451856 bp
Cytosine Count
1357344 bp
Genome Length
6711591 bp
Protein-coding Genes
5110 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s9 family peptidase | E1J03_00080 | Not Available | Negative | 16338 - 18233 | 71513.1 |
| hypothetical protein | E1J03_00085 | Not Available | Negative | 18262 - 18549 | 10732.7 |
| duf3836 domain-containing protein | E1J03_00090 | Not Available | Negative | 18549 - 18971 | 16111.0 |
| bifunctional riboflavin kinase/fad synthetase | E1J03_00095 | Not Available | Negative | 19267 - 20187 | 35218.3 |
| had family phosphatase | E1J03_00100 | Not Available | Negative | 20187 - 20801 | 24017.6 |
| calcium-translocating p-type atpase, pmca-type | E1J03_00105 | Not Available | Negative | 20829 - 23477 | 97609.5 |
| Trna-met | Not Available | Not Available | Positive | 23615 - 23691 | Not Available |
| hypothetical protein | E1J03_00115 | Not Available | Negative | 23964 - 24143 | 6981.13 |
| site-specific integrase | E1J03_00125 | Not Available | Negative | 24982 - 26124 | 43459.1 |
| plasmid maintenance system killer protein | E1J03_00130 | Not Available | Positive | 26527 - 26850 | 12553.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

