Lysobacter sp. N42

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter sp. N42 is a Gram-negative, rod-shaped bacterium characterized by a single replicon in its genomic structure. This organism is part of the genus Lysobacter, which is known for its diverse metabolic capabilities and ecological roles. The genomic accessions available for Lysobacter sp. N42 are cataloged under SKFB00000000.1, providing a reference point for further study and analysis of its genetic information. The distinct traits of Lysobacter sp. N42 position it within a group of bacteria recognized for their potential in biocontrol and bioremediation applications due to their ability to degrade various organic compounds. Ecologically, members of the Lysobacter genus are often found in soil and other environments rich in organic matter, suggesting that Lysobacter sp. N42 may contribute to nutrient cycling and the breakdown of complex substances. This highlights its potential role in maintaining soil health and promoting plant growth, which can be crucial for agricultural practices. Overall, the characteristics of Lysobacter sp. N42 reflect its significance in microbial ecology and its utility in biotechnological applications, underscoring the importance of further research into its capabilities and interactions within the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter sp. N42
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter sp. N42
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter sp. N42 N42_scaffold248, whole genome shotgun sequence.

Gene Summary

Adenine Count

1146631 bp

Thymine Count

1149025 bp

Guanine Count

1638054 bp

Cytosine Count

1645391 bp

Genome Length

5579102 bp

Protein-coding Genes

5087 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pqq-dependent sugar dehydrogenaseEYQ95_00215Not AvailableNegative46649 - 4779441489.1
hypothetical proteinEYQ95_00220Not AvailableNegative47791 - 4827317417.0
nadph-dependent 2,4-dienoyl-coa reductaseEYQ95_00225Not AvailablePositive48431 - 5045573568.9
glu/leu/phe/val dehydrogenaseEYQ95_00230Not AvailablePositive50493 - 5180048196.0
dash family cryptochromeEYQ95_00235Not AvailableNegative51802 - 5301947155.4
cryptochrome/photolyase family proteinEYQ95_00240Not AvailableNegative53019 - 5456360983.1
flavin oxidoreductaseEYQ95_00245Not AvailableNegative54587 - 5528226054.2
duf2256 domain-containing proteinEYQ95_00250Not AvailableNegative55317 - 554575850.15
deoxyribodipyrimidine photo-lyaseEYQ95_00255Not AvailableNegative55435 - 5690457750.3
16s rrna pseudouridine(516) synthase rsuaEYQ95_00260Not AvailablePositive56945 - 5763425912.1

Displaying genes 61 – 70 of 5206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.