Roseococcus sp. SYP-B2431

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Roseomonadaceae

Genus

Roseococcus

Description

Roseococcus sp. SYP-B2431 is an aerobic bacterium, indicating that it requires oxygen for its growth and metabolic processes. This requirement suggests that it thrives in environments where oxygen is readily available, which may influence its ecological niche and interactions with other microorganisms. Genetically, Roseococcus sp. SYP-B2431 contains a single replicon, which is characteristic of many bacteria. This feature may contribute to its genetic stability and adaptability within its specific habitat. The organism's genomic information is accessible through the accession number SJXD00000000.1, which allows for further exploration of its genetic characteristics and potential applications. In terms of ecological impact, the aerobic nature of Roseococcus sp. SYP-B2431 may play a role in biogeochemical cycles, particularly in environments where oxygen is present. Its interactions with other aerobic microorganisms can influence nutrient cycling and organic matter decomposition in its ecosystem. Understanding the traits of Roseococcus sp. SYP-B2431 can provide insights into its potential applications in biotechnology or environmental management, particularly in processes that require aerobic conditions. Overall, this bacterium's specific oxygen requirement and genetic profile underscore its potential significance in ecological and biotechnological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyRoseomonadaceae
GenusRoseococcus
SpeciesRoseococcus sp. SYP-B2431
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseococcus sp. SYP-B2431 NODE_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

693273 bp

Thymine Count

692265 bp

Guanine Count

1662023 bp

Cytosine Count

1661617 bp

Genome Length

4709178 bp

Protein-coding Genes

4398 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase, hydrophobic membrane anchor proteinEJV46_15290Not AvailablePositive3182450 - 318285414571.4
succinate dehydrogenase flavoprotein subunitEJV46_15295Not AvailablePositive3182970 - 318478165842.3
virulence factorEJV46_15300Not AvailablePositive3184784 - 318509511899.0
succinate dehydrogenase iron-sulfur subunitEJV46_15305Not AvailablePositive3185098 - 318588029378.2
n-acetylmuramoyl-l-alanine amidaseEJV46_15310Not AvailableNegative3185944 - 318660023836.5
molecular chaperone djlaEJV46_15315Not AvailableNegative3186618 - 318737927461.0
5-oxoprolinaseEJV46_15320Not AvailablePositive3187478 - 3191191130924.0
asma family proteinEJV46_15325Not AvailablePositive3191188 - 319401997678.0
m20/m25/m40 family metallo-hydrolaseEJV46_15330Not AvailablePositive3194193 - 319559050424.0
duf4010 domain-containing proteinEJV46_15335Not AvailablePositive3195662 - 319690642143.2

Displaying genes 3061 – 3070 of 4473 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.