Pseudomonas sp. IC_126

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. IC_126 is characterized by having a single replicon, which is a key trait indicative of its genetic structure. The organism is cataloged under the accession number SJSS00000000.1, which serves as a reference point for genomic data related to this strain. The single replicon suggests a streamlined and efficient genetic organization, which can be advantageous for its adaptability and survival in various environments. Members of the Pseudomonas genus are well-known for their metabolic versatility and ecological roles, particularly in soil and water ecosystems. They can thrive in diverse conditions, including the ability to degrade various organic compounds, which underscores their importance in bioremediation processes. Understanding the genetic framework of Pseudomonas sp. IC_126, as indicated by its single replicon, may provide insights into its ecological interactions and potential applications in environmental microbiology. Its adaptability could play a significant role in nutrient cycling and the degradation of pollutants, thereby contributing to ecosystem health and stability. As research progresses, the genomic data associated with this strain may reveal further functional capabilities that enhance its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. IC_126
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. IC_126
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. IC_126 NODE_24_length_255_cov_39.187500, whole

Gene Summary

Adenine Count

895600 bp

Thymine Count

918641 bp

Guanine Count

1428233 bp

Cytosine Count

1381751 bp

Genome Length

4624225 bp

Protein-coding Genes

4123 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trigger factorE0D86_03890Not AvailablePositive844288 - 84559848349.3
atp-dependent clp endopeptidase proteolytic subunit clppE0D86_03895Not AvailablePositive845684 - 84632223326.5
atp-dependent clp protease atp-binding subunit clpxE0D86_03900Not AvailablePositive846421 - 84770146526.8
endopeptidase laE0D86_03905Not AvailablePositive847829 - 85022588987.8
dna-binding protein hu-betaE0D86_03910Not AvailablePositive850360 - 8506329073.03
peptidylprolyl isomeraseE0D86_03915Not AvailablePositive850840 - 85269668120.5
enoyl-acp reductaseE0D86_03920Not AvailableNegative852760 - 85355427789.3
abc transporter atp-binding proteinE0D86_03925Not AvailableNegative853535 - 85518160341.6
abc transporter permeaseE0D86_03930Not AvailableNegative855183 - 85620237955.0
microcin c abc transporter permease yejbE0D86_03935Not AvailableNegative856204 - 85727739277.4

Displaying genes 771 – 780 of 4181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.