Pseudomonas sp. IC_126

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. IC_126 is characterized by having a single replicon, which is a key trait indicative of its genetic structure. The organism is cataloged under the accession number SJSS00000000.1, which serves as a reference point for genomic data related to this strain. The single replicon suggests a streamlined and efficient genetic organization, which can be advantageous for its adaptability and survival in various environments. Members of the Pseudomonas genus are well-known for their metabolic versatility and ecological roles, particularly in soil and water ecosystems. They can thrive in diverse conditions, including the ability to degrade various organic compounds, which underscores their importance in bioremediation processes. Understanding the genetic framework of Pseudomonas sp. IC_126, as indicated by its single replicon, may provide insights into its ecological interactions and potential applications in environmental microbiology. Its adaptability could play a significant role in nutrient cycling and the degradation of pollutants, thereby contributing to ecosystem health and stability. As research progresses, the genomic data associated with this strain may reveal further functional capabilities that enhance its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. IC_126
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. IC_126
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. IC_126 NODE_24_length_255_cov_39.187500, whole

Gene Summary

Adenine Count

895600 bp

Thymine Count

918641 bp

Guanine Count

1428233 bp

Cytosine Count

1381751 bp

Genome Length

4624225 bp

Protein-coding Genes

4123 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferredoxin--nadp reductaseE0D86_20630Not AvailableNegative4505733 - 450650929383.3
class i sam-dependent methyltransferaseE0D86_20635Not AvailablePositive4506596 - 450772340420.2
xanthine dehydrogenase family protein molybdopterin-binding subunitE0D86_20640Not AvailableNegative4507909 - 451011379521.7
xanthine dehydrogenase family protein subunit mE0D86_20645Not AvailableNegative4510110 - 451109635403.2
(2fe-2s)-binding proteinE0D86_20650Not AvailableNegative4511093 - 451162618978.8
ncs2 family permeaseE0D86_20655Not AvailablePositive4511983 - 451327844716.1
trna (uridine(54)-c5)-methyltransferase trmaE0D86_20660Not AvailablePositive4513580 - 451467141400.1
duf4345 domain-containing proteinE0D86_20665Not AvailableNegative4514703 - 451529321330.5
duf411 domain-containing proteinE0D86_20670Not AvailablePositive4515475 - 451590915442.7
neutral zinc metallopeptidaseE0D86_20675Not AvailablePositive4516001 - 451686131065.3

Displaying genes 4061 – 4070 of 4181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.