Pseudomonas sp. IC_126

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. IC_126 is characterized by having a single replicon, which is a key trait indicative of its genetic structure. The organism is cataloged under the accession number SJSS00000000.1, which serves as a reference point for genomic data related to this strain. The single replicon suggests a streamlined and efficient genetic organization, which can be advantageous for its adaptability and survival in various environments. Members of the Pseudomonas genus are well-known for their metabolic versatility and ecological roles, particularly in soil and water ecosystems. They can thrive in diverse conditions, including the ability to degrade various organic compounds, which underscores their importance in bioremediation processes. Understanding the genetic framework of Pseudomonas sp. IC_126, as indicated by its single replicon, may provide insights into its ecological interactions and potential applications in environmental microbiology. Its adaptability could play a significant role in nutrient cycling and the degradation of pollutants, thereby contributing to ecosystem health and stability. As research progresses, the genomic data associated with this strain may reveal further functional capabilities that enhance its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. IC_126
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. IC_126
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. IC_126 NODE_24_length_255_cov_39.187500, whole

Gene Summary

Adenine Count

895600 bp

Thymine Count

918641 bp

Guanine Count

1428233 bp

Cytosine Count

1381751 bp

Genome Length

4624225 bp

Protein-coding Genes

4123 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoid-associated protein yejkE0D86_16695Not AvailableNegative3680522 - 368152937919.5
mfs transporterE0D86_16700Not AvailablePositive3681671 - 368288242263.8
hypothetical proteinE0D86_16705Not AvailablePositive3683147 - 36833387264.9
gnat family n-acetyltransferaseE0D86_16710Not AvailablePositive3683342 - 368377316114.2
23s rrna (adenine(1618)-n(6))-methyltransferase rlmfE0D86_16715Not AvailableNegative3683775 - 368477636769.7
ybfb/yjij family mfs transporterE0D86_16720Not AvailableNegative3684820 - 368598942216.4
slc13 family permeaseE0D86_16725Not AvailableNegative3686075 - 368790465017.7
hypothetical proteinE0D86_16730Not AvailableNegative3687917 - 368821311062.1
sodium:proton antiporterE0D86_16735Not AvailableNegative3688288 - 368967049665.9
valine--trna ligaseE0D86_16740Not AvailableNegative3690111 - 3692945107468.0

Displaying genes 3291 – 3300 of 4181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.