Pseudomonas sp. IC_126

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. IC_126 is characterized by having a single replicon, which is a key trait indicative of its genetic structure. The organism is cataloged under the accession number SJSS00000000.1, which serves as a reference point for genomic data related to this strain. The single replicon suggests a streamlined and efficient genetic organization, which can be advantageous for its adaptability and survival in various environments. Members of the Pseudomonas genus are well-known for their metabolic versatility and ecological roles, particularly in soil and water ecosystems. They can thrive in diverse conditions, including the ability to degrade various organic compounds, which underscores their importance in bioremediation processes. Understanding the genetic framework of Pseudomonas sp. IC_126, as indicated by its single replicon, may provide insights into its ecological interactions and potential applications in environmental microbiology. Its adaptability could play a significant role in nutrient cycling and the degradation of pollutants, thereby contributing to ecosystem health and stability. As research progresses, the genomic data associated with this strain may reveal further functional capabilities that enhance its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. IC_126
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. IC_126
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. IC_126 NODE_24_length_255_cov_39.187500, whole

Gene Summary

Adenine Count

895600 bp

Thymine Count

918641 bp

Guanine Count

1428233 bp

Cytosine Count

1381751 bp

Genome Length

4624225 bp

Protein-coding Genes

4123 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome-associated translation inhibitor raiaE0D86_10320Not AvailableNegative2317772 - 231808011780.2
rna polymerase factor sigma-54E0D86_10325Not AvailableNegative2318149 - 231965757161.8
lps export abc transporter atp-binding proteinE0D86_10330Not AvailableNegative2319807 - 232053226448.2
lipopolysaccharide transport periplasmic protein lptaE0D86_10335Not AvailableNegative2320532 - 232108020069.8
lps export abc transporter periplasmic protein lptcE0D86_10340Not AvailableNegative2321067 - 232163921514.8
had family hydrolaseE0D86_10345Not AvailableNegative2321648 - 232216918916.8
kpsf/gutq family sugar-phosphate isomeraseE0D86_10350Not AvailableNegative2322170 - 232314434306.9
abc transporter atp-binding proteinE0D86_10355Not AvailablePositive2323405 - 232422029332.9
lipid asymmetry maintenance abc transporter permease subunit mlaeE0D86_10360Not AvailablePositive2324213 - 232501028459.2
outer membrane lipid asymmetry maintenance protein mladE0D86_10365Not AvailablePositive2325010 - 232546816286.7

Displaying genes 2041 – 2050 of 4181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.