Pseudomonas sp. IC_126

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. IC_126 is characterized by having a single replicon, which is a key trait indicative of its genetic structure. The organism is cataloged under the accession number SJSS00000000.1, which serves as a reference point for genomic data related to this strain. The single replicon suggests a streamlined and efficient genetic organization, which can be advantageous for its adaptability and survival in various environments. Members of the Pseudomonas genus are well-known for their metabolic versatility and ecological roles, particularly in soil and water ecosystems. They can thrive in diverse conditions, including the ability to degrade various organic compounds, which underscores their importance in bioremediation processes. Understanding the genetic framework of Pseudomonas sp. IC_126, as indicated by its single replicon, may provide insights into its ecological interactions and potential applications in environmental microbiology. Its adaptability could play a significant role in nutrient cycling and the degradation of pollutants, thereby contributing to ecosystem health and stability. As research progresses, the genomic data associated with this strain may reveal further functional capabilities that enhance its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. IC_126
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. IC_126
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. IC_126 NODE_24_length_255_cov_39.187500, whole

Gene Summary

Adenine Count

895600 bp

Thymine Count

918641 bp

Guanine Count

1428233 bp

Cytosine Count

1381751 bp

Genome Length

4624225 bp

Protein-coding Genes

4123 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrogen regulation protein nr(ii)E0D86_07740Not AvailableNegative1711981 - 171307240635.4
duf4124 domain-containing proteinE0D86_07745Not AvailableNegative1713240 - 171386622794.3
duf4124 domain-containing proteinE0D86_07750Not AvailableNegative1713863 - 171438418962.5
glutamate--ammonia ligaseE0D86_07755Not AvailableNegative1714607 - 171601351946.6
trna 4-thiouridine(8) synthase thiiE0D86_07760Not AvailablePositive1716350 - 171780454843.7
translational gtpase typaE0D86_07765Not AvailablePositive1717974 - 171979767165.5
shlb/fhac/hecb family hemolysin secretion/activation proteinE0D86_07770Not AvailablePositive1720023 - 172172963502.4
filamentous hemagglutinin n-terminal domain-containing proteinE0D86_07775Not AvailablePositive1721730 - 1731743342991.0
type i addiction module toxin, syme familyE0D86_07780Not AvailableNegative1732114 - 17322274312.47
hypothetical proteinE0D86_07785Not AvailablePositive1732611 - 173333325262.9

Displaying genes 1531 – 1540 of 4181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.