Kribbella speibonae strain YM55

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Kribbellaceae

Genus

Kribbella

Description

Kribbella speibonae strain YM55 is a notable bacterium characterized by the presence of flagella, which suggests its capability for motility. This trait is essential for various ecological interactions, including colonization and nutrient acquisition. The strain possesses a single replicon, indicating a streamlined genome organization, which can influence its replication and overall genetic stability. The accession number for Kribbella speibonae strain YM55 is SJKC00000000.1, which provides a reference for genomic and taxonomic studies. The specific traits of this strain contribute to its potential roles in various environments, possibly including soil and aquatic ecosystems, where motility can enhance its survival and adaptability. Understanding the motility and genetic structure of Kribbella speibonae strain YM55 can provide insights into its ecological functions and interactions within microbial communities. The presence of flagella may facilitate its movement towards favorable conditions or resources, which is crucial for its ecological niche. Overall, the characteristics of Kribbella speibonae strain YM55 emphasize its potential importance in environmental microbiology and its role in ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyKribbellaceae
GenusKribbella
SpeciesKribbella speibonae
Strainstrain YM55

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Kribbella speibonae strain YM55

Gene Summary

Adenine Count

1464223 bp

Thymine Count

1461574 bp

Guanine Count

3182133 bp

Cytosine Count

3177462 bp

Genome Length

9285392 bp

Protein-coding Genes

8606 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yebc/pmpr family dna-binding transcriptional regulatorE0H92_40060Not AvailableNegative8397119 - 839788026962.5
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtE0H92_40065Not AvailableNegative8397917 - 839852821888.2
hypothetical proteinE0H92_40070Not AvailableNegative8398504 - 839904919898.5
pyridoxal 5'-phosphate synthase lyase subunit pdxsE0H92_40075Not AvailableNegative8399067 - 839996631833.5
plp-dependent aminotransferase family proteinE0H92_40080Not AvailableNegative8400040 - 840139248579.5
bifunctional 3'-5' exonuclease/dna polymeraseE0H92_40085Not AvailablePositive8401528 - 840318360271.9
sigma-70 family rna polymerase sigma factorE0H92_40090Not AvailableNegative8403434 - 840487054607.3
s-methyl-5'-thioadenosine phosphorylaseE0H92_40095Not AvailablePositive8404940 - 840569226837.8
nad-dependent epimerase/dehydratase family proteinE0H92_40100Not AvailablePositive8405689 - 840671736759.4
hamp domain-containing histidine kinaseE0H92_40105Not AvailableNegative8406694 - 840783040432.6

Displaying genes 7901 – 7910 of 8668 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.