Hansschlegelia quercus strain Dub

sphere

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylopilaceae

Genus

Hansschlegelia

Description

Hansschlegelia quercus strain Dub is a Gram-negative, spherical bacterium characterized by its single replicon. This strain is notable for its unique genetic identification, cataloged under the accession number SIUB00000000.1. The Gram-negative classification indicates that Hansschlegelia quercus strain Dub possesses a thin peptidoglycan layer surrounded by an outer membrane, a trait common among many bacteria that influences its response to antibiotics and environmental stressors. The spherical shape, or coccoid morphology, may affect its metabolic processes and interactions with other organisms in its environment. Understanding the genetic makeup and characteristics of Hansschlegelia quercus strain Dub can provide insights into its ecological role, particularly in its native habitat. As a member of the bacterial community associated with oak trees, this strain could play a significant role in nutrient cycling and decomposition processes. The specific adaptations of Gram-negative, spherical bacteria like this strain may enhance their survival in specific ecological niches, suggesting a specialized function within the microbiome of oak ecosystems. In summary, the traits of Hansschlegelia quercus strain Dub reveal its classification, morphology, and genetic identity, which together contribute to its potential ecological significance in the context of oak tree-associated microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylopilaceae
GenusHansschlegelia
SpeciesHansschlegelia quercus
Strainstrain Dub

Profile

Physiology
Gram staining propertiesGram-negative
Shapesphere
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hansschlegelia quercus strain Dub

Gene Summary

Adenine Count

591030 bp

Thymine Count

588963 bp

Guanine Count

1197171 bp

Cytosine Count

1202642 bp

Genome Length

3579806 bp

Protein-coding Genes

3259 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEYR15_15225Not AvailableNegative3213947 - 321425810833.0
cysteine hydrolaseEYR15_15230Not AvailableNegative3214273 - 321487520418.5
3-methyl-2-oxobutanoate hydroxymethyltransferaseEYR15_15235Not AvailableNegative3215122 - 321598529699.8
molecular chaperone djiaEYR15_15240Not AvailablePositive3216195 - 321692926079.8
n-acetylmuramoyl-l-alanine amidaseEYR15_15245Not AvailablePositive3216926 - 321768727987.9
lytic transglycosylase domain-containing proteinEYR15_15250Not AvailablePositive3217783 - 321864630168.5
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhEYR15_15260Not AvailablePositive3219371 - 322100856806.6
hypothetical proteinEYR15_15265Not AvailablePositive3221005 - 322156219921.5
penicillin-binding protein 2EYR15_15270Not AvailablePositive3221559 - 322339165205.4
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseEYR15_15275Not AvailablePositive3223388 - 322484249899.4

Displaying genes 3011 – 3020 of 3341 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.