Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain PCM_1221 861 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273516 bp
Thymine Count
1270607 bp
Guanine Count
1207664 bp
Cytosine Count
1220036 bp
Genome Length
4972307 bp
Protein-coding Genes
4196 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-heptose--lps heptosyltransferase rfaf | EYY91_02865 | Not Available | Positive | 644994 - 646043 | 38555.7 |
| lipopolysaccharide heptosyltransferase rfac | EYY91_02870 | Not Available | Positive | 646043 - 647002 | 35848.8 |
| o-antigen ligase rfal | EYY91_02875 | Not Available | Positive | 647031 - 648257 | 46260.4 |
| lipopolysaccharide heptosyltransferase family protein | EYY91_02880 | Not Available | Negative | 648284 - 649369 | 41735.4 |
| 3-deoxy-d-manno-oct-2-ulosonate iii transferase waaz | EYY91_02885 | Not Available | Negative | 649415 - 650194 | 30040.6 |
| lipopolysaccharide core heptose(ii) kinase rfay | EYY91_02890 | Not Available | Negative | 650204 - 650929 | 28372.5 |
| lipopolysaccharide 3-alpha-galactosyltransferase | EYY91_02895 | Not Available | Negative | 650958 - 651965 | 39026.4 |
| lipopolysaccharide core heptose(i) kinase rfap | EYY91_02900 | Not Available | Negative | 652004 - 652804 | 31243.2 |
| glycosyltransferase family 1 protein | EYY91_02905 | Not Available | Negative | 652797 - 653921 | 42428.5 |
| lipopolysaccharide core heptosyltransferase rfaq | EYY91_02910 | Not Available | Negative | 653921 - 654994 | 40475.9 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


