Hafnia alvei strain PCM_1221 861

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Hafnia alvei strain PCM_1221 861 is a Gram-negative, rod-shaped bacterium classified as a facultative anaerobe. This strain is notably isolated from a hot spring habitat, suggesting it can thrive in high-temperature environments. It possesses a single replicon, indicating a streamlined genetic structure. This bacterium has been associated with various hosts, including Homo sapiens, Metazoa, Viridiplantae, Amphibia, and specifically Gastrotheca, as well as insect hosts like Apis mellifera and members of the order Anthophila. The presence of H. alvei in both vertebrate and invertebrate hosts, particularly in bees, highlights its ecological versatility and potential interactions within diverse ecosystems. Health effects attributed to Hafnia alvei strain PCM_1221 861 include septicemia in humans, alongside mild diseases in other organisms. Additionally, it has been linked to septicemia in bees, which raises concerns regarding its impact on pollinator health. The bacterium's association with both human and bee health underscores its ecological significance, particularly in the context of biodiversity and the health of ecosystems reliant on pollination services. In summary, Hafnia alvei strain PCM_1221 861 exemplifies a microbe that occupies unique ecological niches while also posing potential health risks to a range of hosts, highlighting the interconnectedness of microbial life and its broader implications for environmental health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
Strainstrain PCM_1221 861

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia alvei strain PCM_1221 861
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathot spring
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei strain PCM_1221 861, whole genome shotgun sequence.

Gene Summary

Adenine Count

1273516 bp

Thymine Count

1270607 bp

Guanine Count

1207664 bp

Cytosine Count

1220036 bp

Genome Length

4972307 bp

Protein-coding Genes

4196 genes

Non-Coding Genes

364 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alcohol dehydrogenaseEYY91_01865Not AvailableNegative422393 - 42355042070.6
arac family transcriptional regulatorEYY91_01870Not AvailablePositive423758 - 42466933926.0
alpha/beta fold hydrolaseEYY91_01875Not AvailablePositive424700 - 42598348574.7
porin family proteinEYY91_01880Not AvailableNegative426110 - 42674222659.1
diguanylate cyclaseEYY91_01885Not AvailableNegative427280 - 42805028650.6
hypothetical proteinEYY91_01890Not AvailableNegative428090 - 42900735110.3
pas domain-containing methyl-accepting chemotaxis proteinEYY91_01895Not AvailableNegative429177 - 43072155857.8
hypothetical proteinEYY91_01900Not AvailablePositive431136 - 43243446807.4
virulence factor srfbEYY91_01905Not AvailablePositive432453 - 435413110843.0
hypothetical proteinEYY91_01910Not AvailablePositive435410 - 43781289057.5

Displaying genes 691 – 700 of 4560 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Mild diseasesCausesPMC5615607
Bee septicemiaCausesPMC8729767
SepticemiaCausesPMC8729767

Displaying health effects 1 – 3 of 3 in total