Hafnia alvei strain PCM_1221 861

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Hafnia alvei strain PCM_1221 861 is a Gram-negative, rod-shaped bacterium classified as a facultative anaerobe. This strain is notably isolated from a hot spring habitat, suggesting it can thrive in high-temperature environments. It possesses a single replicon, indicating a streamlined genetic structure. This bacterium has been associated with various hosts, including Homo sapiens, Metazoa, Viridiplantae, Amphibia, and specifically Gastrotheca, as well as insect hosts like Apis mellifera and members of the order Anthophila. The presence of H. alvei in both vertebrate and invertebrate hosts, particularly in bees, highlights its ecological versatility and potential interactions within diverse ecosystems. Health effects attributed to Hafnia alvei strain PCM_1221 861 include septicemia in humans, alongside mild diseases in other organisms. Additionally, it has been linked to septicemia in bees, which raises concerns regarding its impact on pollinator health. The bacterium's association with both human and bee health underscores its ecological significance, particularly in the context of biodiversity and the health of ecosystems reliant on pollination services. In summary, Hafnia alvei strain PCM_1221 861 exemplifies a microbe that occupies unique ecological niches while also posing potential health risks to a range of hosts, highlighting the interconnectedness of microbial life and its broader implications for environmental health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
Strainstrain PCM_1221 861

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia alvei strain PCM_1221 861
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathot spring
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei strain PCM_1221 861, whole genome shotgun sequence.

Gene Summary

Adenine Count

1273516 bp

Thymine Count

1270607 bp

Guanine Count

1207664 bp

Cytosine Count

1220036 bp

Genome Length

4972307 bp

Protein-coding Genes

4196 genes

Non-Coding Genes

364 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
autotransporter outer membrane beta-barrel domain-containing proteinEYY91_01275Not AvailableNegative285374 - 28816999027.9
pts phosphocarrier protein nprEYY91_01280Not AvailableNegative288361 - 2886339758.61
rnase adapter rapzEYY91_01285Not AvailableNegative288644 - 28949532299.7
pts iia-like nitrogen regulatory protein ptsnEYY91_01290Not AvailableNegative289638 - 29010216862.5
ribosome hibernation promoting factorEYY91_01295Not AvailableNegative290227 - 29051410952.2
rna polymerase factor sigma-54EYY91_01300Not AvailableNegative290538 - 29197153783.7
lipopolysaccharide abc transporter atp-binding proteinEYY91_01305Not AvailableNegative292105 - 29283026888.5
lipopolysaccharide abc transporter substrate-binding protein lptaEYY91_01310Not AvailableNegative292837 - 29346622273.6
lps export abc transporter periplasmic protein lptcEYY91_01315Not AvailableNegative293435 - 29401322026.9
3-deoxy-manno-octulosonate-8-phosphatase kdscEYY91_01320Not AvailableNegative294010 - 29457620325.8

Displaying genes 571 – 580 of 4560 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Mild diseasesCausesPMC5615607
Bee septicemiaCausesPMC8729767
SepticemiaCausesPMC8729767

Displaying health effects 1 – 3 of 3 in total