Hafnia alvei strain PCM_1221 861

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Hafnia alvei strain PCM_1221 861 is a Gram-negative, rod-shaped bacterium classified as a facultative anaerobe. This strain is notably isolated from a hot spring habitat, suggesting it can thrive in high-temperature environments. It possesses a single replicon, indicating a streamlined genetic structure. This bacterium has been associated with various hosts, including Homo sapiens, Metazoa, Viridiplantae, Amphibia, and specifically Gastrotheca, as well as insect hosts like Apis mellifera and members of the order Anthophila. The presence of H. alvei in both vertebrate and invertebrate hosts, particularly in bees, highlights its ecological versatility and potential interactions within diverse ecosystems. Health effects attributed to Hafnia alvei strain PCM_1221 861 include septicemia in humans, alongside mild diseases in other organisms. Additionally, it has been linked to septicemia in bees, which raises concerns regarding its impact on pollinator health. The bacterium's association with both human and bee health underscores its ecological significance, particularly in the context of biodiversity and the health of ecosystems reliant on pollination services. In summary, Hafnia alvei strain PCM_1221 861 exemplifies a microbe that occupies unique ecological niches while also posing potential health risks to a range of hosts, highlighting the interconnectedness of microbial life and its broader implications for environmental health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia alvei
Strainstrain PCM_1221 861

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia alvei strain PCM_1221 861
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathot spring
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia alvei strain PCM_1221 861, whole genome shotgun sequence.

Gene Summary

Adenine Count

1273516 bp

Thymine Count

1270607 bp

Guanine Count

1207664 bp

Cytosine Count

1220036 bp

Genome Length

4972307 bp

Protein-coding Genes

4196 genes

Non-Coding Genes

364 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i pantothenate kinaseEYY91_03475Not AvailablePositive769079 - 77002635883.1
bifunctional biotin--[acetyl-coa-carboxylase] synthetase/biotin operon repressorEYY91_03480Not AvailableNegative770075 - 77103435315.8
udp-n-acetylmuramate dehydrogenaseEYY91_03485Not AvailableNegative771031 - 77206837970.4
iron abc transporter substrate-binding proteinEYY91_03490Not AvailableNegative772207 - 77316634377.3
autotransporter outer membrane beta-barrel domain-containing proteinEYY91_03500Not AvailablePositive773733 - 77481940389.6
dna mismatch repair protein mutsEYY91_03505Not AvailablePositive775084 - 77764294842.2
murein hydrolase activator nlpdEYY91_03515Not AvailableNegative778827 - 77982234624.4
protein-l-isoaspartate(d-aspartate) o-methyltransferaseEYY91_03520Not AvailableNegative780212 - 78084423426.4
5'/3'-nucleotidase sureEYY91_03525Not AvailableNegative780838 - 78159927151.3
trna pseudouridine(13) synthase trudEYY91_03530Not AvailableNegative781580 - 78262639254.3

Displaying genes 1001 – 1010 of 4560 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Mild diseasesCausesPMC5615607
Bee septicemiaCausesPMC8729767
SepticemiaCausesPMC8729767

Displaying health effects 1 – 3 of 3 in total