Vibrio cholerae strain IDH06781

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain IDH06781 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, primarily functioning as a heterotroph. This strain is notable for its ability to thrive in multiple habitats and is characterized by its free-living biotic relationship. It possesses flagella, which contribute to its mobility despite being classified as non-motile in certain contexts. The bacterium has a single replicon and is surrounded by two membranes. Strain IDH06781 has an optimal growth temperature of 20°C, placing it within a mesophilic temperature range. This environmental adaptability allows it to colonize various hosts, including Homo sapiens, Mollusca, Mammalia, and specifically Penaeus vannamei, indicating its ecological versatility. The pathogenicity of this strain is particularly concerning, as it is associated with numerous health effects in humans. These include severe conditions such as cholera, gastrointestinal infections, and vibriosis, alongside other infections like pneumonia, peritonitis, and soft tissue infections. The strain has been implicated in clinical cholera outbreaks and can lead to diarrheal infections, which are a significant public health concern. Understanding Vibrio cholerae strain IDH06781's traits is crucial for public health strategies aimed at controlling cholera and related illnesses. Its ability to infect a range of hosts highlights the importance of monitoring environmental reservoirs and potential transmission routes to mitigate the impacts of this pathogen in both human and aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
Strainstrain IDH06781

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae strain IDH06781
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain IDH06781 scaffold00105, whole genome

Gene Summary

Adenine Count

1188480 bp

Thymine Count

1208073 bp

Guanine Count

1106822 bp

Cytosine Count

1038321 bp

Genome Length

4541698 bp

Protein-coding Genes

4118 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulator transcription factorEYB64_04590Not AvailableNegative995935 - 99659424529.7
hypothetical proteinEYB64_04595Not AvailableNegative996606 - 99701315877.1
dead/deah box helicaseEYB64_04600Not AvailableNegative997278 - 99906267309.5
16s rrna pseudouridine(516) synthase rsuaEYB64_04605Not AvailablePositive999196 - 99989126326.4
bcr/cfla family multidrug efflux mfs transporterEYB64_04610Not AvailablePositive1000210 - 100141542963.5
duf2913 family proteinEYB64_04615Not AvailablePositive1001337 - 100207427547.8
duf2867 domain-containing proteinEYB64_04620Not AvailableNegative1002178 - 100361454021.5
mate family efflux transporterEYB64_04625Not AvailablePositive1003742 - 100511849603.0
abc transporter atp-binding proteinEYB64_04630Not AvailablePositive1005244 - 100591524727.9
abc transporter permeaseEYB64_04635Not AvailablePositive1005839 - 100834992659.4

Displaying genes 1001 – 1010 of 4244 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total