Glaciihabitans arcticus strain RP-3-7

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Glaciihabitans

Description

Glaciihabitans arcticus strain RP-3-7 is characterized by having a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession SISG00000000.1, providing a unique identifier for its genomic sequence within biological databases. As a member of the genus Glaciihabitans, this strain is likely adapted to cold environments, reflecting the ecological niche from which it is derived. The specific adaptations that Glaciihabitans arcticus may possess, such as metabolic pathways or resistance mechanisms to extreme cold, are not detailed in the provided information. However, the presence of a single replicon suggests a streamlined genomic structure that could facilitate rapid growth under specific environmental conditions. Understanding the genomic features of Glaciihabitans arcticus strain RP-3-7 can provide insights into its ecological role. Microorganisms in polar regions often play crucial roles in biogeochemical cycles, particularly in nutrient cycling and organic matter decomposition. The unique genomic traits of such strains may enable them to thrive in extreme conditions, contributing to microbial diversity and ecosystem functions in cold environments. Further research on this strain could enhance our knowledge of microbial life in Arctic ecosystems and their potential applications in biotechnology or environmental monitoring.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusGlaciihabitans
SpeciesGlaciihabitans arcticus
Strainstrain RP-3-7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Glaciihabitans arcticus strain RP-3-7 contig2, whole genome

Gene Summary

Adenine Count

522681 bp

Thymine Count

526897 bp

Guanine Count

1065883 bp

Cytosine Count

1057281 bp

Genome Length

3172742 bp

Protein-coding Genes

2984 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtEYE40_04895Not AvailableNegative1033901 - 103450020968.0
pyridoxal 5'-phosphate synthase lyase subunit pdxsEYE40_04900Not AvailableNegative1034490 - 103538331176.5
pyridoxal kinase pdxyEYE40_04905Not AvailablePositive1035456 - 103630730138.0
hit domain-containing proteinEYE40_04910Not AvailableNegative1036285 - 103686320811.5
threonine--trna ligaseEYE40_04915Not AvailableNegative1036863 - 103881572647.6
had family hydrolaseEYE40_04920Not AvailableNegative1038843 - 103959826455.6
hypothetical proteinEYE40_04925Not AvailableNegative1039707 - 104023119228.7
hypothetical proteinEYE40_04930Not AvailableNegative1040249 - 104065614867.0
Trna-valNot AvailableNot AvailablePositive1040840 - 1040914Not Available
Trna-cysNot AvailableNot AvailablePositive1040940 - 1041010Not Available

Displaying genes 971 – 980 of 3036 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.