Glaciihabitans arcticus strain RP-3-7

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Glaciihabitans

Description

Glaciihabitans arcticus strain RP-3-7 is characterized by having a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession SISG00000000.1, providing a unique identifier for its genomic sequence within biological databases. As a member of the genus Glaciihabitans, this strain is likely adapted to cold environments, reflecting the ecological niche from which it is derived. The specific adaptations that Glaciihabitans arcticus may possess, such as metabolic pathways or resistance mechanisms to extreme cold, are not detailed in the provided information. However, the presence of a single replicon suggests a streamlined genomic structure that could facilitate rapid growth under specific environmental conditions. Understanding the genomic features of Glaciihabitans arcticus strain RP-3-7 can provide insights into its ecological role. Microorganisms in polar regions often play crucial roles in biogeochemical cycles, particularly in nutrient cycling and organic matter decomposition. The unique genomic traits of such strains may enable them to thrive in extreme conditions, contributing to microbial diversity and ecosystem functions in cold environments. Further research on this strain could enhance our knowledge of microbial life in Arctic ecosystems and their potential applications in biotechnology or environmental monitoring.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusGlaciihabitans
SpeciesGlaciihabitans arcticus
Strainstrain RP-3-7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Glaciihabitans arcticus strain RP-3-7 contig2, whole genome

Gene Summary

Adenine Count

522681 bp

Thymine Count

526897 bp

Guanine Count

1065883 bp

Cytosine Count

1057281 bp

Genome Length

3172742 bp

Protein-coding Genes

2984 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseEYE40_04795Not AvailableNegative1013026 - 101388329484.5
endolytic transglycosylase mltgEYE40_04800Not AvailableNegative1013876 - 101517146933.4
holliday junction resolvase ruvxEYE40_04805Not AvailableNegative1015168 - 101562315886.1
alanine--trna ligaseEYE40_04810Not AvailableNegative1015641 - 101829594744.4
hypothetical proteinEYE40_04815Not AvailableNegative1018350 - 10185778088.65
duf948 domain-containing proteinEYE40_04820Not AvailableNegative1018621 - 101897412029.8
30s ribosomal protein s4EYE40_04825Not AvailableNegative1019042 - 101967123749.0
replication-associated recombination protein aEYE40_04830Not AvailableNegative1019877 - 102123848404.0
peptidylprolyl isomeraseEYE40_04835Not AvailablePositive1021305 - 102212628205.8
duf349 domain-containing proteinEYE40_04840Not AvailablePositive1022236 - 102346845238.1

Displaying genes 951 – 960 of 3036 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.