Glaciihabitans arcticus strain RP-3-7

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Glaciihabitans

Description

Glaciihabitans arcticus strain RP-3-7 is characterized by having a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession SISG00000000.1, providing a unique identifier for its genomic sequence within biological databases. As a member of the genus Glaciihabitans, this strain is likely adapted to cold environments, reflecting the ecological niche from which it is derived. The specific adaptations that Glaciihabitans arcticus may possess, such as metabolic pathways or resistance mechanisms to extreme cold, are not detailed in the provided information. However, the presence of a single replicon suggests a streamlined genomic structure that could facilitate rapid growth under specific environmental conditions. Understanding the genomic features of Glaciihabitans arcticus strain RP-3-7 can provide insights into its ecological role. Microorganisms in polar regions often play crucial roles in biogeochemical cycles, particularly in nutrient cycling and organic matter decomposition. The unique genomic traits of such strains may enable them to thrive in extreme conditions, contributing to microbial diversity and ecosystem functions in cold environments. Further research on this strain could enhance our knowledge of microbial life in Arctic ecosystems and their potential applications in biotechnology or environmental monitoring.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusGlaciihabitans
SpeciesGlaciihabitans arcticus
Strainstrain RP-3-7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Glaciihabitans arcticus strain RP-3-7 contig2, whole genome

Gene Summary

Adenine Count

522681 bp

Thymine Count

526897 bp

Guanine Count

1065883 bp

Cytosine Count

1057281 bp

Genome Length

3172742 bp

Protein-coding Genes

2984 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rip metalloproteaseEYE40_02485Not AvailablePositive545934 - 54726246932.5
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseEYE40_02490Not AvailablePositive547325 - 54847340349.5
proline--trna ligaseEYE40_02495Not AvailablePositive548736 - 55049963979.8
moxr family atpaseEYE40_02500Not AvailablePositive550496 - 55148835779.7
duf58 domain-containing proteinEYE40_02505Not AvailablePositive551509 - 55239633005.6
hypothetical proteinEYE40_02510Not AvailablePositive552383 - 55285617536.2
vwa domain-containing proteinEYE40_02515Not AvailablePositive552847 - 55383335936.2
vwa domain-containing proteinEYE40_02520Not AvailablePositive553830 - 55484635425.3
tetratricopeptide repeat proteinEYE40_02525Not AvailablePositive554420 - 55551741062.1
transcription termination/antitermination protein nusaEYE40_02530Not AvailablePositive555610 - 55661736206.1

Displaying genes 491 – 500 of 3036 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.