Glaciihabitans arcticus strain RP-3-7

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Glaciihabitans

Description

Glaciihabitans arcticus strain RP-3-7 is characterized by having a single replicon, which is indicative of its genomic organization. The strain is cataloged under the accession SISG00000000.1, providing a unique identifier for its genomic sequence within biological databases. As a member of the genus Glaciihabitans, this strain is likely adapted to cold environments, reflecting the ecological niche from which it is derived. The specific adaptations that Glaciihabitans arcticus may possess, such as metabolic pathways or resistance mechanisms to extreme cold, are not detailed in the provided information. However, the presence of a single replicon suggests a streamlined genomic structure that could facilitate rapid growth under specific environmental conditions. Understanding the genomic features of Glaciihabitans arcticus strain RP-3-7 can provide insights into its ecological role. Microorganisms in polar regions often play crucial roles in biogeochemical cycles, particularly in nutrient cycling and organic matter decomposition. The unique genomic traits of such strains may enable them to thrive in extreme conditions, contributing to microbial diversity and ecosystem functions in cold environments. Further research on this strain could enhance our knowledge of microbial life in Arctic ecosystems and their potential applications in biotechnology or environmental monitoring.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusGlaciihabitans
SpeciesGlaciihabitans arcticus
Strainstrain RP-3-7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Glaciihabitans arcticus strain RP-3-7 contig2, whole genome

Gene Summary

Adenine Count

522681 bp

Thymine Count

526897 bp

Guanine Count

1065883 bp

Cytosine Count

1057281 bp

Genome Length

3172742 bp

Protein-coding Genes

2984 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine abc transporter substrate-binding proteinEYE40_02435Not AvailablePositive535249 - 53645443757.4
abc transporter atp-binding proteinEYE40_02440Not AvailablePositive536479 - 53767843105.8
abc transporter permeaseEYE40_02445Not AvailablePositive537590 - 53860336833.3
abc transporter permeaseEYE40_02450Not AvailablePositive538603 - 53941228980.8
aminotransferase class iii-fold pyridoxal phosphate-dependent enzymeEYE40_02455Not AvailablePositive539412 - 54076748207.3
4-aminobutyrate--2-oxoglutarate transaminaseEYE40_02460Not AvailableNegative540781 - 54213046458.0
osmc family peroxiredoxinEYE40_02465Not AvailablePositive542176 - 54264616673.5
duf2330 domain-containing proteinEYE40_02470Not AvailablePositive542689 - 54370835959.3
peptidylprolyl isomeraseEYE40_02475Not AvailablePositive543805 - 54477332902.3
1-deoxy-d-xylulose-5-phosphate reductoisomeraseEYE40_02480Not AvailablePositive544792 - 54587737575.6

Displaying genes 481 – 490 of 3036 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.