Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | EYY78_02635 | Not Available | Negative | 530545 - 531411 | 31015.6 |
| pentapeptide repeat-containing protein | EYY78_02640 | Not Available | Positive | 531785 - 532405 | 23397.0 |
| na+/h+ antiporter | EYY78_02645 | Not Available | Negative | 532559 - 534208 | 60527.5 |
| ncs2 family permease | EYY78_02650 | Not Available | Negative | 534359 - 535708 | 45714.4 |
| redox-sensitive transcriptional activator soxr | EYY78_02655 | Not Available | Negative | 536254 - 536718 | 17150.7 |
| superoxide response transcriptional regulator soxs | EYY78_02660 | Not Available | Positive | 536804 - 537127 | 12911.6 |
| c-di-gmp phosphodiesterase pdec | EYY78_02665 | Not Available | Negative | 537130 - 538716 | 60820.8 |
| hypothetical protein | EYY78_02670 | Not Available | Positive | 539146 - 539427 | 10304.0 |
| single-stranded dna-binding protein ssb1 | EYY78_02675 | Not Available | Negative | 539526 - 540062 | 18976.1 |
| excinuclease abc subunit uvra | EYY78_02680 | Not Available | Positive | 540316 - 543138 | 103874.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




