Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | EYY78_28190 | Not Available | Positive | 5345520 - 5345729 | 7885.13 |
| molecular chaperone groel | EYY78_28195 | Not Available | Negative | 5345730 - 5346026 | 10335.3 |
| atp synthase subunit b | EYY78_28200 | Not Available | Negative | 5346027 - 5346101 | 2820.68 |
| atp synthase f0 subunit c | EYY78_28205 | Not Available | Negative | 5346160 - 5346281 | 4279.53 |
| portal protein | EYY78_28210 | Not Available | Negative | 5346282 - 5346567 | 10894.1 |
| o18ab/o18ac family o-antigen flippase | EYY78_28215 | Not Available | Positive | 5346568 - 5346768 | 7194.11 |
| pyrimidine-nucleoside phosphorylase | EYY78_28220 | Not Available | Negative | 5346769 - 5346993 | 8640.29 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | EYY78_28225 | Not Available | Positive | 5347057 - 5347344 | 10339.5 |
| 50s ribosomal protein l11 | EYY78_28230 | Not Available | Positive | 5347345 - 5347497 | 5282.39 |
| 50s ribosomal protein l1 | EYY78_28235 | Not Available | Positive | 5347502 - 5347631 | 4979.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




