Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system death-on-curing family toxin | EYY78_26270 | Not Available | Positive | 5137769 - 5138182 | 15670.6 |
| hypothetical protein | EYY78_26275 | Not Available | Positive | 5138409 - 5138669 | 9575.43 |
| hypothetical protein | EYY78_26280 | Not Available | Positive | 5138736 - 5138924 | 7603.6 |
| porin ompf | EYY78_26285 | Not Available | Positive | 5139090 - 5140178 | 39335.4 |
| aspartate/tyrosine/aromatic aminotransferase | EYY78_26290 | Not Available | Positive | 5140363 - 5141553 | 43575.7 |
| pentapeptide repeat-containing protein | EYY78_26295 | Not Available | Positive | 5141630 - 5142205 | 21839.2 |
| type vi secretion system tip protein vgrg | EYY78_26300 | Not Available | Positive | 5142206 - 5142702 | 19346.3 |
| glucose-6-phosphate isomerase | EYY78_26305 | Not Available | Negative | 5142914 - 5144563 | 61475.1 |
| lysine-sensitive aspartokinase 3 | EYY78_26315 | Not Available | Positive | 5145088 - 5146437 | 48566.6 |
| zeta toxin | EYY78_26320 | Not Available | Positive | 5146582 - 5147508 | 34512.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




