Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone | EYY78_26050 | Not Available | Negative | 5109312 - 5109866 | 20753.4 |
| phosphatase | EYY78_26055 | Not Available | Negative | 5109890 - 5110627 | 26833.9 |
| glyoxylate/hydroxypyruvate reductase ghra | EYY78_26060 | Not Available | Negative | 5110682 - 5111620 | 35314.3 |
| Trna-ser | Not Available | Not Available | Positive | 5111854 - 5111941 | Not Available |
| hypothetical protein | EYY78_26070 | Not Available | Negative | 5112134 - 5113120 | 38792.7 |
| type iii secretion system protein | EYY78_26075 | Not Available | Positive | 5113272 - 5113508 | 8519.8 |
| flagellar biosynthesis protein flhb | EYY78_26080 | Not Available | Positive | 5113517 - 5114248 | 28473.6 |
| flhb hrpn yscu spas family protein | EYY78_26085 | Not Available | Positive | 5114275 - 5114637 | 13822.5 |
| invasion protein | EYY78_26090 | Not Available | Negative | 5114698 - 5114991 | 11004.1 |
| luxr family transcriptional regulator | EYY78_26095 | Not Available | Negative | 5115062 - 5115493 | 16275.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




