Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaba permease | EYY78_23745 | Not Available | Negative | 4679281 - 4680681 | 51097.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EYY78_23750 | Not Available | Negative | 4680992 - 4682272 | 45591.2 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | EYY78_23755 | Not Available | Negative | 4682286 - 4683734 | 51770.1 |
| l-2-hydroxyglutarate oxidase | EYY78_23760 | Not Available | Negative | 4683757 - 4685025 | 46072.6 |
| carbon starvation induced protein csid | EYY78_23765 | Not Available | Negative | 4685045 - 4686022 | 37386.6 |
| replication initiation protein repe | EYY78_23770 | Not Available | Positive | 4686933 - 4687688 | 29379.2 |
| alpha/beta hydrolase | EYY78_23780 | Not Available | Negative | 4688329 - 4688570 | 9025.97 |
| alpha/beta fold hydrolase | EYY78_23785 | Not Available | Negative | 4688687 - 4689550 | 32449.8 |
| lipopolysaccharide core heptose(ii)-phosphate phosphatase | EYY78_23790 | Not Available | Negative | 4689802 - 4690383 | 21761.1 |
| eal domain-containing protein | EYY78_23795 | Not Available | Negative | 4691156 - 4691920 | 28236.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




