Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| head-tail adaptor | EYY78_23585 | Not Available | Negative | 4653226 - 4653615 | 14303.7 |
| hypothetical protein | EYY78_23590 | Not Available | Negative | 4653602 - 4654156 | 19435.9 |
| duf4054 domain-containing protein | EYY78_23595 | Not Available | Negative | 4654153 - 4654560 | 14886.5 |
| hypothetical protein | EYY78_23600 | Not Available | Negative | 4654526 - 4654894 | 13288.5 |
| duf2184 domain-containing protein | EYY78_23605 | Not Available | Negative | 4654935 - 4655044 | 4012.83 |
| is21-like element is100 family transposase | EYY78_23610 | Not Available | Positive | 4655045 - 4655953 | 35424.5 |
| aaa family atpase | EYY78_23615 | Not Available | Positive | 4655950 - 4656638 | 25893.5 |
| isas1 family transposase | EYY78_23620 | Not Available | Positive | 4656779 - 4657655 | 33253.8 |
| hypothetical protein | EYY78_23630 | Not Available | Negative | 4658837 - 4659046 | 7972.0 |
| permease | EYY78_23635 | Not Available | Negative | 4659626 - 4660627 | 35165.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




