Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone h1 | EYY78_23435 | Not Available | Negative | 4629953 - 4630051 | 3702.44 |
| bifunctional dna primase/helicase | EYY78_23440 | Not Available | Negative | 4630052 - 4631932 | 71072.4 |
| helix-turn-helix domain-containing protein | EYY78_23445 | Not Available | Negative | 4632040 - 4632795 | 28371.7 |
| hypothetical protein | EYY78_23450 | Not Available | Negative | 4632958 - 4633254 | 11077.3 |
| mfs transporter | EYY78_23455 | Not Available | Negative | 4633435 - 4634637 | 42838.3 |
| autotransporter outer membrane beta-barrel domain-containing protein | EYY78_23460 | Not Available | Negative | 4634866 - 4635564 | 25962.0 |
| dna-3-methyladenine glycosylase i | EYY78_23465 | Not Available | Positive | 4635722 - 4636285 | 21073.2 |
| n-acetyltransferase | EYY78_23470 | Not Available | Positive | 4636282 - 4636722 | 17159.8 |
| molybdopterin guanine dinucleotide-containing s/n-oxide reductase | EYY78_23475 | Not Available | Negative | 4636691 - 4639024 | 85897.4 |
| ompa family lipoprotein | EYY78_23480 | Not Available | Positive | 4639177 - 4639836 | 22198.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




