Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf333 domain-containing protein | EYY78_23285 | Not Available | Positive | 4604024 - 4604278 | 8942.87 |
| duf488 domain-containing protein | EYY78_23290 | Not Available | Negative | 4604300 - 4604647 | 13340.9 |
| 2-nitroimidazole transporter | EYY78_23295 | Not Available | Negative | 4604702 - 4605883 | 41264.9 |
| arac family transcriptional regulator | EYY78_23300 | Not Available | Positive | 4605980 - 4606801 | 30544.3 |
| duf441 domain-containing protein | EYY78_23305 | Not Available | Negative | 4606758 - 4607204 | 15256.6 |
| hypothetical protein | EYY78_23310 | Not Available | Positive | 4607374 - 4607478 | 3771.81 |
| mischarged aminoacyl-trna deacylase | EYY78_23315 | Not Available | Negative | 4607479 - 4607982 | 17894.8 |
| ggdef domain-containing protein | EYY78_23320 | Not Available | Negative | 4608025 - 4609515 | 56605.8 |
| ggdef domain-containing protein | EYY78_23325 | Not Available | Negative | 4609696 - 4610881 | 45072.7 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | EYY78_23330 | Not Available | Positive | 4611103 - 4611669 | 20819.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




