Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EYY78_23030 | Not Available | Positive | 4552868 - 4553320 | 16739.5 |
| ntp pyrophosphohydrolase | EYY78_23035 | Not Available | Positive | 4553332 - 4553508 | 6612.79 |
| lytic transglycosylase catalytic | EYY78_23040 | Not Available | Negative | 4553617 - 4554174 | 19769.7 |
| d-amino acid dehydrogenase | EYY78_23045 | Not Available | Positive | 4554227 - 4555525 | 47610.1 |
| alanine racemase | EYY78_23050 | Not Available | Positive | 4555535 - 4556605 | 38872.9 |
| potassium/proton antiporter | EYY78_23055 | Not Available | Negative | 4556991 - 4558727 | 62209.1 |
| muramoyltetrapeptide carboxypeptidase | EYY78_23060 | Not Available | Negative | 4558822 - 4559736 | 33628.6 |
| membrane-bound lytic murein transglycosylase emta | EYY78_23065 | Not Available | Positive | 4559836 - 4560447 | 22213.7 |
| flagellar brake protein | EYY78_23070 | Not Available | Negative | 4560449 - 4561183 | 27858.8 |
| glsb/yeaq/ymge family stress response membrane protein | EYY78_23075 | Not Available | Positive | 4561384 - 4561638 | 8703.27 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




