Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase 1 | EYY78_22735 | Not Available | Positive | 4493818 - 4496415 | 97355.0 |
| hth-type transcriptional regulator cysb | EYY78_22740 | Not Available | Positive | 4496625 - 4497599 | 36152.5 |
| ymia family putative membrane protein | EYY78_22745 | Not Available | Positive | 4497930 - 4498058 | 4866.05 |
| hypothetical protein | EYY78_22750 | Not Available | Positive | 4498061 - 4498228 | 6338.19 |
| hypothetical protein | EYY78_22755 | Not Available | Positive | 4498342 - 4498437 | 3822.77 |
| aconitate hydratase acna | EYY78_22760 | Not Available | Positive | 4498601 - 4501276 | 97738.9 |
| gtp cyclohydrolase ii | EYY78_22765 | Not Available | Negative | 4501340 - 4501930 | 21837.3 |
| phosphatidylglycerophosphatase b | EYY78_22770 | Not Available | Positive | 4502100 - 4502864 | 29022.8 |
| lipopolysaccharide assembly protein lapa | EYY78_22775 | Not Available | Positive | 4503013 - 4503321 | 11352.1 |
| lipopolysaccharide assembly protein lapb | EYY78_22780 | Not Available | Positive | 4503328 - 4504497 | 44533.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




