Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SL3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325089 bp
Thymine Count
1326663 bp
Guanine Count
1349738 bp
Cytosine Count
1353487 bp
Genome Length
5355602 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional anthranilate synthase glutamate amidotransferase component trpg/anthranilate phosphoribosyltransferase trpd | EYY78_22685 | Not Available | Negative | 4484595 - 4486190 | 56873.4 |
| anthranilate synthase component i | EYY78_22690 | Not Available | Negative | 4486190 - 4487752 | 57594.9 |
| trp operon leader peptide | EYY78_22695 | Not Available | Negative | 4487844 - 4487888 | 1723.19 |
| 5'-3' exoribonuclease | EYY78_22700 | Not Available | Positive | 4488026 - 4488907 | 32609.9 |
| threonylcarbamoyl-amp synthase | EYY78_22705 | Not Available | Positive | 4488904 - 4489524 | 23213.2 |
| 23s rrna pseudouridine(2605) synthase rlub | EYY78_22710 | Not Available | Positive | 4489625 - 4490497 | 32599.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | EYY78_22715 | Not Available | Negative | 4490537 - 4491127 | 22052.3 |
| ycik family oxidoreductase | EYY78_22720 | Not Available | Negative | 4491124 - 4491882 | 27947.6 |
| protease sohb | EYY78_22725 | Not Available | Positive | 4492102 - 4493151 | 39368.7 |
| duf2498 family protein | EYY78_22730 | Not Available | Negative | 4493187 - 4493438 | 9386.17 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




